Microbiology repetitorium

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Microbiology repetitorium[edit | edit source]

Aerobic: Pseudomonads , Mycobacteria, Neisseria , Corynebacteria , Bacillus anthracis , Nokardie , Bordetella , Brucella , Francisella, Legionella , Leptospira
Strictly anaerobic: Clostridium botulinum , Cl. tetani , Cl. difficult
Aerotolerant anaerobes: Bacteroides spp. , Cl. perfringens , Cl. histolyticum
Optional anaerobic: most bacteria, incl. E.coli , Staphylococci , Streptococci , Vibria
Microaerophilic: Lactobacilli, Treponema pal. , Actinomycetes , Campylobacter , Helicobacter pylori , Borrelia
Capnophilic: Meningococci , Gonococci , Haemophilus
Catalase positive: Staphylococci (not Streptococci!), Meningococci , Gonococci , Enterobacteria , Pseudomonads , Bruces , Campylobacter , Corynebacteria , Listeria
Obligatory intracellular parasites: Chlamydia , Rickettsia, Coxiella burnetii , Mycobacteria
Hemolyzing: Cl. botulinum , Cl. tetani et al., E. coli (EHEC strains), Aeromonas, Pseudomonas , Bordetella pertussis et parapertussis, STAU , Streptococcus pyogenes , Strep. agalactiae , Streptococcus pneumoniae , oral (viridizing) streptococci (alpha-hemolysis), Bacillus cereus
Gram-positive: Cl. botulinum , Cl. tetani , Cl. perfringens , Cl. difficile , Actinomycetes , Staphylococcus aureus , Staphylococcus epidermidis , Streptococcus pyogenes and otherstreptococci, Enterococci, Bacillus anthracis et cereus, Corynebacterium diphtheriae and other corynebacteria, Listeria monocytogenes , Nokardie
Gram-negative: Bacteroides spp. , Fusobacterium , E.coli , Klebsiella , Enterobacter, Proteus, Citrobacter, Yersinia pestis , Yersinia enterocolitica Yersinia pseudotuberculosis , Salmonella typhi , Shigelly , Vibrio cholerae , Aeromonas , Haemophilus influenzae , Pasterurella mella , Brucella , Bartonella , Francisella, Campylobacter jejuni ,Helicobacter pylori , Legionella pneumophila , Neisseria gonorrhoeae , Neisseria meningitidis , Treponema pallidum , Borrelia burgdorferi et recurrentis, Rickettsia, ( Chlamydia trachomatis ), Coxiella burnetii ,
Movable: Clostridia (x Cl. Perfingens ), Enterobacteria (x Klebsiella, Shigella, Yersinia pestis ), Salmonella , Vibrio , Aeromonas, Pseudomonas , Campylobacter , Treponema pallidum , Leptospira interrogans, Borrelia burgdorferi , Listeria monocytogenes , Bacillus
Bacteria
G +
coke
aerobic
Micrococcus Micrococcus luteus
Rhodococcus Rhodococcus equi
facultatively anaerobic
Enterococcus Enterococcus duransEnterococcus faecalisEnterococcus faecium
Streptococcus Streptococcus agalactiaeStreptococcus mutansStreptococcus pneumoniaeStreptococcus pyogenesStreptococcus suisOral streptococci
Staphylococcus Staphylococcus aureusStaphylococcus epidermidisStaphylococcus intermediusStaphylococcus saprophyticus
anaerobic
Peptococcus Peptococcus niger
Peptostreptococcus Peptostreptococcus anaerobiusPeptostreptococcus prevotiiPeptostreptococcus vaginalis
sticks
aerobic + facultative anaerobic
Arcanobacter Arcanobacterium haemolyticum
Bacillus Bacillus anthracisBacillus cereus
Corynebacterium Corynebacterium diphtheriaeCorynebacterium jeikeiumCorynebacterium ulceransCorynebacterium urealyticum
Erysipelothrix Erysipelothrix rhusiopathiae
Listeria Listeria monocytogenes
Nocardia Nocardia asteroidesNocardia brasiliensis
Rhodococcus Rhodococcus equi
anaerobic
Actinomyces Actinomyces israeli • Actinomyces naeslundi
Bifidobacterium Bifidobacterium dentium
Clostridium Clostridium botulinumClostridium difficileClostridium novyiClostridium tetaniClostridium perfringensClostridium septicumClostridium ulcerans
Lactobacillus Lactobacillus acidophilus
Propionibacterium Propionibacterium acnesPropionibacterium propionicus
Go
coke
aerobic
Acinetobacter Acinetobacter calcoaceticus
Moraxella Moraxella catarrhalisMoraxella lacunata
Neisseria Neisseria gonorrhoeaeNeisseria meningitidis • Non-pathogenic species of Neisseria
anaerobic
Veillonella Veillonella alcalescensVeillonella parvula
cocobacilli
aerobic
Rickettsia Rickettsia prowazekiiRickettsia rickettsiiRickettsia typhi
sticks
aerobic
Alcaligentes Alkaligentes feacalis
Bartonella Bartonella bacilliformisBartonella henselaeBartonella quintana
Bordetella Bordetella bronchisepticaBordetella parapertussisBordetella pertussis
Brucella Brucella abortusBrucella canisBrucella melitensisBrucella suis
Burkholderia Burkholderia cepaciaBurkholderia malleiBurkholderia pseudomallei
Francisella Francisella tularensis
Legionella Legionella pneumophila
Kingella Kingella denitrificansKingella kingaeKingella oralis
Pseudomonas Pseudomonas aeruginosaPseudomonas fluorescens
Stenotrophomonas Stenotrophomonas maltophilia
facultatively anaerobic
Actinobacillus Actinobacillus equliActinobacillus lignieresii
Aeromonas Aermonas caviaeAeromonas hydrophilaAeromonas sobria
Afipia Afipia felis
Citrobacter Citrobacter freundiCitrobacter koseri
Eikenella Eikenella corrodens
Enterobacter Enterobacter aerogenesEnterobacter cloacae
Escherichia Escherichia coli
Haemophilus Haemophilus ducreyiHaemophilus haemolyticusHaemophilus influenzaeHaemophilus parainfluenzae
Klebsiella Klebsiella granulomatisKlebsiella oxytocaKlebsiella pneumoniae
Pasteurella Pasteurella haemolyticaPasteurella multocidaPasteurella ureae
Plesiomonas Plesiomonas shigelloides
Proteus Proteus mirabilisProteus vulgaris
Salmonella Salmonella Enteritidis • Salmonella Typhi • Salmonella Paratyphi
Serratia Serratia marcescens
Shigella Shigella boydiiShigella dysenteriaeShigella flexneriShigella sonnei
Vibrio Vibrio choleraeVibrio parahemolyticus
Yersinia Yersinia enterocoliticaYersinia pestisYersinia pseudotuberculosis
microaerophilic
Campylobacter Campylobacter coliCampylobacter fetusCampylobacter jejuni
Helicobacter Helicobacter pylori
anaerobic
Bacteroides Bacteroides fragilisBacteroides vulgatus
Fusobacterium Fusobacterium necrophorumFusobacterium nucleatumFusobacterium stabile
Leptotricha Leptotricha buccalis
Mobiluncus Mobiluncus curtisiiMobiluncus mulieris
Prevotella Prevotella melaninogenica
Porphyromonas Porphyromonas gingivalis
acid resistant
sticks
aerobic
Mycobacterium Atypical mycobacteriaMycobacterium tuberculosisMycobacterium leprae
non-stainable G +/-
spiral
strictly aerobic
Leptospira Leptospira biflexaLeptospira interrogansLeptospira parva
microaerophilic
Borrelia Borrelia burgdorferiBorrelia hermsiBorrelia recurrentisBorrelia vincenti
strictly anaerobic
Treponema Non-pathogenic treponemsTreponema carateumTreponema pallidumTreponema phagedenisTreponema pertenue
Portal: Microbiology
Viruses
RNA viruses
Unwrapped
ds
Reoviry genus Orthoreovirus , genus Orbivirus , genus Rotavirus , genus Coltivirus
ss (+)
Astroviruses genus Mamastrovirus
Caliciviry genus Norovirus
Picornaviry genus Enterovirus - coxsackie viruses , echoviruses , enteroviruses 68–71 , polioviruses , genus Rhinovirus , genus Hepatovirus - hepatitis A virus
Hepeviry hepatitis E virus
Wrapped
ss (+)
Coronaviruses genus Coronavirus , genus Torovirus
Flaviviruses genus Flavivirus - dengue virusesJapanese encephalitis virustick-borne encephalitis complex virusesZika virusyellow fever virus , genus Hepacivirus - hepatitis C virus
Retroviruses genus Alpharetrovirus , genus Betaretrovirus , genus Gammaretrovirus , genus Deltaretrovirus , genus Epsilonretrovirus , genus Lentivirus - HIV , genus Spumavirus
Togaviry genus Alphavirus - EEE • VEE • WEE , genus Rubivirus - rubella virus
ss (-)
Arenaviruses Lassa fever virus , lymphocytic choriomeningitis virus
Bunyaviry genus Bunyavirus , genus Hantavirus , genus Nairovirus , genus Phlebovirus
Filovir genus Ebolavirus - Ebola viruses , genus Marburgvirus - Marburg disease virus
Orthomyxoviruses genus Influenzavirus A , genus Influenzavirus B , genus Influenzavirus C , genus Thogotovirus
Paramyxoviruses genus Morbillivirus - measles virus , genus Paramyxovirus - parainfluenza virusmumps virus , genus Pneumovirus - human respiratory syncytial virus
Rhabdoviruses genus Lyssavirus - rabies virus , genus Vesiculovirus - vesicular stomatitis virus
genus Deltavirus - hepatitis D virus
DNA viruses
Unwrapped
ds
Adenoviruses genus Aviadenovirus , genus Mastadenovirus
Papillomaviruses human papillomavirus
Polyomaviruses BC virus , JK virus
ss
Parvoviruses parvovirus B19
Wrapped
ds
Herpesviruses herpes simplex virus • varicella zoster virus • Epstein-Barr virus • cytomegalovirus • human herpesvirus-6 (HHV-6) • human herpesvirus-7 (HHV-7) • human herpesvirus-8 (HHV-8)
Hepadnaviry hepatitis B virus
Poxviruses smallpox virus • vaccinia virus • molluscum contagiosum virus
Unconventional viruses Prions
Portal: Microbiology
Parasites
Protozoa (Protozoa)
Amoeboid protozoa
Exchange offices Acanthamoeba spp.Balamuthia mandrillarisNaegleria fowleri
Whips
Leishmania Leishmania braziliensLeishmania donovaniLeishmania infantumLeishmania majorLeishmania tropica
intestinal parasites Dientamoeba fragilisEntamoeba histolyticaGiardia intestinalis
Trichomonads Trichomonas vaginalis
Trypanosomes Trypanosoma cruziTrypanosoma gambienseTrypanosoma rhodensiense
Rinning Balantidium coli
Sporozoa
Babesie Babesia bovisBabesia divergensBabesia microti
Coccidia Cryptosporidium parvumCyclospora cayetanensisIsospora belli
Microsporidia Enterocytozoon bieneusiEncephalitozoon spp.
interhost Toxoplasma gondii
Plasmodia Plasmodium falciparumPlasmodium malariaePlasmodium ovale • Plasmodium vivax
Helmint
Trematoda (Motolice)
liver and lung mites Clonorchis sinensisFasciola hepaticaOpistorchis spp.Paragonimus spp.
Schistosomes Schistosoma haematobiumSchistosoma japonicumSchistosoma intercalatumSchistosoma mansoniSchistosoma mekongi
intestinal tapeworm Fasciolopsis buskiHeterophyes heterophyesMetagonimus yokogawai
Nematode (Nematode)
Filaria Brugia malayiDirofilaria immitisDirofilaria repensLoa loaMansonella perstansOnchocerca volvulusWuchereria bancrofti
intestinal nematodes Ancylostoma duodenaleAscaris lumbricoidesEnterobius vermicularisNecator americanusStrongyloides stercoralisTrichuris trichuria
tissue nematodes Dracunculus medinensisToxocara spp.Trichinella spiralis
Cestoda (Tasemnice)
intestinal cestodes Diphyllobothrium latumDypilidum caninumHymenolepis nanaTaenia saginataTaenia solium
tissue cestodes Echinococcus granulosusEchinococcus multilocularisTaenia solium
Arthropods
Insect Anoplura (lice) • Diptera (diptera) • Cimex lectulariusSiphonaptera (fleas)
Spiders Ixodes ricinusSarcoptes scabiei
Intracellular parasites
Chlamydia Chlamydia pneumoniaeChlamydia psittaciChlamydia trachomatis
Portal: Microbiology

Links[edit | edit source]

References[edit | edit source]

  • BEDNÁŘ, M, V FRAŇKOVÁ and J SCHINDLER, et al. Medical microbiology - bacteriology, virology, parasitology. 1st edition. Prague: Marvil, 1996. 558 pp.  ISBN 80-238-0297-6 .