Centrifugation

Centrifugation serves for separation of particles by using centrifugational force. Actually, it is frequently accelerated sedimentation. While particles are separated according to their density by effect of gravitation during sedimentation, much bigger centrifugation acceleration influences them in course of centrifugation. Separation of the mixture is therefore much faster.

Centrifugation can be used to remove solid particles from a suspension in the most simple application. Removal of blood clot or blood elements from the whole blood can serve as an example. Centrifugation is also useful for separation of a mixture of immisceable liquids. At high speeds that can be reached in high-speed centrifuges and ultracentrifuges, even individual fractions of cells from a cell homogenate can be isolated. It is also possible to separate macromolecules in a mixture.

Centrifugational force
The course of separation of a mixture will apparently be the faster, the faster spins the rotor of the centrifuge. Practically, the value of relative centrifugation force is frequently used. It says how many times is the centrifugation acceleration higher than gravitation acceleration (g). It is usually expressed as multiple of g.

Suppose that the same mixture is split into two test-tubes. One test-tube is placed into a rack and the mixture in it is left to freely sediment. The other tube is centrifuged at 10 000× g. It means that particles in the centrifuged tube re influenced by ten thousand times bigger acceleration compared to the freely standing tube.

It can be easily derived that the relative centrifugational force depends on the radius of the rotor and on the number of revolutions per minute:


 * R = 1,12 · n2 · r · 10-5

where R is the relative centrifugation force, n is the number of revolutions per minute and r is the radius of the rotor in centimeters.

The speed of movement of particles in the mixture is called sedimentation speed. In a simplified model, this speed depends on the relative centrifugtion force and on the difference between densities of particles and the environment in which particles are dispersed. It is also influenced by the size of particles and by the viscosity of the mixture.

Sedimantation coefficient is frequently used instead of sedimentation speed. The coefficient describes behaviour of a concrete particle regardless the conditions of centrifugation. Sedimantation coefficient virtually corresponds to the sedimentation speed in a field of acceleration equal to unity (i.e. approx. 10× smaller than gravitation acceleration). The sedimentation coefficient is indicated in seconds or a multiplicative unit Svedberg is used (1 Svedberg = 1 S = 10-13 s).

Literally, a statement that subunits of the ribosome are of a "size" 30 S and 50 S can be found. This piece of information describes their behaviour during ultracentrifugation of cell fractions. More or less it means the if the subunit 30 S is left in a freely standing test-tube (it means at gravitation acceleration roughly 10 ms-2), it sinks down at the rate
 * 30 · 10-13 s · 10 ms-2 = 3·10-11 ms-1, which is less than a millimeter per a year.

In fact, no sedimentation would take place at all because diffusion would counteract against sedimentation. Apparently, to separate the particles, several orders larger acceleration must be used.

Centrifuges
If small relative centrifugation forces (up to 20 000× g) are sufficient for separation of the mixture, simple low-speed centrifuges can be used. On the other hand, for sedimantation of small particles, ultracentrifuges are used. The rotor of ultracentrifuges is operated in deep vacuum which decreases its braking by air and heating up. Components of ultracentrifuges must withstand enormous forces and therefore there are extreme demands on their manufacturing. The price of ultracentrifuges is therefore very high.

High-speed centrifuges are in between low-speed centrifuges and ultracentrifuges. They are operated without vacuum but relative centrifugation force 100 000× g may still be reached.

Spinning at high rates leads to warming of sample due to friction with air. Moreover, biologic samples must frequently be handled at low temperatures. Many centrifuges are therefore equipped with cooling.

Practical remarks
Centrifuged samples must be inserted in such a way that the rotor remains balanced. Centrifugational forces by which samples act on the shaft of the rotor must be cancelled each by the other. It means that in the opposite postitions test-tubes of the same weight must be placed. the higher is the centrifugation speed the more precisely the rotor must be balanced. For low speeds it is sufficient to use the same type of test-tubes and measure the same volume of samples to them. In contrary, for ultracentrifugation the test-tubes are weightet on scales and the volume of sample is adjusted so that the opposite test-tubes have exactly the same weight.